Sigmund Ramberg

Scientific publications

Ramberg, Sigmund; Krasnov, Aleksei; Colquhoun, Duncan John; Wallace, Christian; Andreassen, Rune (2022). Expression analysis of Moritella viscosa-challenged Atlantic salmon identifies disease-responding Genes, MicroRNAs and their predicted target genes and pathways. International Journal of Molecular Sciences . Vol. 23:11200.
https://hdl.handle.net/11250/3025752

Shwe, Alice; Krasnov, Aleksei; Visnovska, Martina; Ramberg, Sigmund; Østbye, Tone-kari K; Andreassen, Rune (2022). Differential Expression of miRNAs and Their Predicted Target Genes Indicates That Gene Expression in Atlantic Salmon Gill Is Post-Transcriptionally Regulated by miRNAs in the Parr-Smolt Transformation and Adaptation to Sea Water. International Journal of Molecular Sciences . Vol. 23.
https://hdl.handle.net/11250/3016238

Shwe, Alice; Krasnov, Aleksei; Visnovska, Martina; Ramberg, Sigmund; Østbye, Tone-kari K; Andreassen, Rune (2022). Expression Analysis in Atlantic Salmon Liver Reveals miRNAs Associated with Smoltification and Seawater Adaptation. Biology (Basel) . Vol. 11. https://doi.org/10.3390/ biology11050688

Ramberg, Sigmund; Andreassen, Rune (2021). MicroSalmon: A Comprehensive, Searchable Resource of Predicted MicroRNA Targets and 3’UTR Cis-Regulatory Elements in the Full-Length Sequenced Atlantic Salmon Transcriptome. Non-coding RNA . Vol. 7.

Ramberg, Sigmund; Høyheim, Bjørn; Østbye, Tone-Kari K; Andreassen, Rune (2021). A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. 22 p. Frontiers in Genetics . Vol. 12.
https://hdl.handle.net/11250/2756069

Shwe, Alice; Østbye, Tone-Kari K; Krasnov, Aleksei; Ramberg, Sigmund; Andreassen, Rune (2020). Characterization of Differentially Expressed miRNAs and Their Predicted Target Transcripts during Smoltification and Adaptation to Seawater in Head Kidney of Atlantic Salmon. Genes . Vol. 11.
https://hdl.handle.net/11250/2678195

Dissemination

Lekanova, Nadezhka; Hansen, Sine Alise Hartvigsen; Ramberg, Sigmund; Høyheim, Bjørn; Andreassen, Rune; Horsberg, Tor Einar; Bakke, Marit Jørgensen (2022). A de novo full-length mRNA transcriptome for Lepeophtheirus salmonis. SeaLice2022. Sea Lice conference international.

Ramberg, Sigmund; Andreassen, Rune (2022). A de novo full-length mRNA transcriptome generated from hybrid-corrected PacBio long-reads improves the transcript annotation and identifies thousands of novel splice variants in Atlantic Salmon. Havbruk 2022. Norges forskningsråd.

Ramberg, Sigmund; Andreassen, Rune (2022). A transcriptome generated from hybrid-corrected PacBio long-reads in Atlantic Salmon, which provides 71000 high-quality full-length sequenced mRNAs, and identifies thousands of novel splice variants. European Aquaculture Society meeting 2022. European Aquaculture Society.

Ramberg, Sigmund; Andreassen, Rune (2022). MicroSalmon: Comprehensive Databases for Predicted microRNA Targets and 3’UTR Cis-Regulatory Elements in the Full-Length Sequenced Atlantic Salmon Transcriptome. Plant and Animal Genome conference 2022. Plant and Animal Genome Conference genomic.

Shwe, Alice; Østbye, Tone-Kari K; Ramberg, Sigmund; Krasnov, Aleksei; Andreassen, Rune (2022). Characterization of differentially expressed miRNAs and their predicted target transcripts during smoltification and adaptation to seawater in head kidney of Atlantic salmon. Plant and Animal Genome conference 2022. Plant and Animal Genome Conference genomic.

Shwe, Alice; Østbye, Tone-Kari K; Ramberg, Sigmund; Krasnov, Aleksei; Andreassen, Rune (2022). Characterization of differentially expressed miRNAs and their predicted target transcripts during smoltification and adaptation to seawater in head kidney of Atlantic salmon. Aquaculture workshop Plant and Animal Genome Conference 2022. Plant and Animal Genome Conference Aquaculture.

Ramberg, Sigmund; Østbye, Tone-Kari K; Høyheim, Bjørn; Andreassen, Rune (2022). A de novo full-length mRNA transcriptome generated from hybrid-corrected PacBio long-reads improves the transcript annotation and identifies thousands of novel splice variants in Atlantic Salmon. Plant and Animal Genome conference 2022. Plant and Animal Genome Conference genomic.

Ramberg, Sigmund; Østbye, Tone-Kari K; Høyheim, Bjørn; Andreassen, Rune (2022). A de novo full-length mRNA transcriptome generated from hybrid-corrected PacBio long-reads improves the transcript annotation and identifies thousands of novel splice variants in Atlantic Salmon. Aquaculture workshop Plan and Animal Genome Conference 2022. Plant and Animal Genome Conference Aquaculture.

Ramberg, Sigmund; Andreassen, Rune (2021). A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. Seminar series of Faculty of Health, OsloMet. OsloMet.

Andreassen, Rune; Ramberg, Sigmund (2021). Atlantic salmon Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads. GIYK01000000