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Ansatteoversikt
Rune Andreassen

Rune Andreassen

Stillingstittel
  • professor
Besøksadresse
  • Pilestredet 50, 0167 Oslo
Telefon
  • Mobil: +47 930 53 273
  • Kontor: +47 672 36 274
E-post
  • rune.andreassen@oslomet.no
Tilhørighet

Fagfelt

Metodeutvikling   Populasjonsgenetikk   Rettsgenetikk   MiRNA   Genkarakterisering i Salmo salar   Dypsekvensering

Forskningsprosjekter

Avsluttede forskningsprosjekter

Publikasjoner og forskningsresultater

Vitenskapelige publikasjoner

Brand, Anne-Fleur; Waugh, Courtney Alice; Fernandes, Jorge Manuel de Oliveira; Klaassen, Marcel; Wille, Michelle; Jaspers, Veerle Leontina B; Andreassen, Rune (2025). Circulating miRNAome of avian influenza-infected ruddy turnstones (Arenaria interpres). Journal of Avian Biology. Vol. 2025.
https://doi.org/10.1111/jav.03404

Andreassen, Rune ; Hansen, Berit; Pokrovskaya, Liya; Zhakov, Vladimir; Kling, Daniel; Klutsch, Cornelya; Fløystad, Ida; Eiken, Hans Geir; Hagen, Snorre (2024). A DNA profiling system for conservation management of Kamchatka brown bear (Ursus arctos piscator); population data and system performance from 16 autosomal STRs. Forensic Science International: Animals and Environments. Vol. 6.
https://doi.org/10.1016/j.fsiae.2024.100092

Xue, Xi; Eslamloo, Khalil; Caballero-Solares, Albert; Katan, Tomer; Umasuthan, Navaneethaiyer; Taylor, Richard G.; Fast, Mark D.; Andreassen, Rune ; Rise, Matthew L. (2024). Characterization of the impact of dietary immunostimulant CpG on the expression of mRNA biomarkers involved in the immune responses in Atlantic salmon (Salmo salar). Fish and Shellfish Immunology. Vol. 153.
https://doi.org/10.1016/j.fsi.2024.109840

Hansen, Sine Alise Hartvigsen; Ramberg, Sigmund; Kiryushchenko, Nadezhda; Høyheim, Bjørn; Horsberg, Tor Einar; Andreassen, Rune ; Bakke, Marit Jørgensen (2023). De novo high-accuracy transcriptomes from long-read sequencing reveals a wide variety of novel splice variants in copepodids and adult female salmon lice (Lepeophtheirus salmonis). Frontiers in Marine Science. Vol. 10.
https://doi.org/10.3389/fmars.2023.1167402

Ramberg, Sigmund; Krasnov, Aleksei; Colquhoun, Duncan John; Wallace, Christian; Andreassen, Rune (2022). Expression analysis of Moritella viscosa-challenged Atlantic salmon identifies disease-responding Genes, MicroRNAs and their predicted target genes and pathways. International Journal of Molecular Sciences. Vol. 23.
https://doi.org/10.3390/ijms231911200

Chakraborty, Setu; Woldemariam, Nardos Tesfaye ; Visnovska, Martina; Rise, Matthew L.; Boyce, Danny; Santander, Javier; Andreassen, Rune (2022). Characterization of miRNAs in Embryonic, Larval, and Adult Lumpfish Provides a Reference miRNAome for Cyclopterus lumpus. Biology (Basel). Vol. 11.
https://doi.org/10.3390/biology11010130

Shwe, Alice; Krasnov, Aleksei; Visnovska, Martina; Ramberg, Sigmund; Østbye, Tone-kari K; Andreassen, Rune (2022). Differential Expression of miRNAs and Their Predicted Target Genes Indicates That Gene Expression in Atlantic Salmon Gill Is Post-Transcriptionally Regulated by miRNAs in the Parr-Smolt Transformation and Adaptation to Sea Water. International Journal of Molecular Sciences. Vol. 23.
https://doi.org/10.3390/ijms23158831

Østbye, Tone-Kari K; Woldemariam, Nardos Tesfaye ; Lundberg, Camilla Elise; Berge, Gerd Marit; Ruyter, Bente; Andreassen, Rune (2021). Modulation of hepatic miRNA expression in Atlantic salmon (Salmo salar) by family background and dietary fatty acid composition. Journal of Fish Biology.
https://doi.org/10.1111/jfb.14649

Smith, Nicole; Umasuthan, Navaneethaiyer; Kumar, Surendra; Woldemariam, Nardos Tesfaye ; Andreassen, Rune ; Christian, Sherri; Rise, Matthew L. (2021). Transcriptome Profiling of Atlantic Salmon Adherent Head Kidney Leukocytes Reveals That Macrophages Are Selectively Enriched During Culture. Frontiers in Immunology. Vol. 12.
https://doi.org/10.3389/fimmu.2021.709910

Ramberg, Sigmund; Høyheim, Bjørn; Østbye, Tone-Kari K; Andreassen, Rune (2021). A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. Frontiers in Genetics. Vol. 12.
https://doi.org/10.3389/fgene.2021.656334



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Forskningsrapporter

Andreassen, Rune ; Bjørn, Høyheim; Ramberg, Sigmund (2025). Generation of full-length mRNA transcriptome and miRNA target prediction resources utilized in the study of miRNAs associated with response to Moritella Viscousa infection in Atlantic salmon. ISBN: 9788283646412. 158 s. OsloMet - storbyuniversitetet.
https://hdl.handle.net/11250/3268557

Andreassen, Rune ; Shwe, Alice (2023). Characterization of differentially expressed miRNAs and their predicted target transcripts associated with smoltification and seawater adaptation in Atlantic salmon. ISBN: 9788283645361. OsloMet - storbyuniversitetet.
https://hdl.handle.net/11250/3150266

Woldemariam, Nardos Tesfaye ; Andreassen, Rune (2021). MicroRNAs and their role in virus disease and immune response in Atlantic salmon. ISBN: 9788283643046. 69 s. OsloMet-storbyuniversitetet.
https://hdl.handle.net/11250/4925171

Kopatz, Alexander; Andreassen, Rune ; Kling, Daniel; Randa, Rolf; Forfang, Kristin; Hagen, Snorre; Eiken, Hans Geir (2017). Family groups of brown bears in Sør-Varanger, Norway Application of SNP and STR markers to reconstruct pedigrees from DNA-samples noninvasively collected 2004-2016. ISBN: 9788217020066. 40 s. NIBIO.
https://hdl.handle.net/11250/2503431

Kopatz, Alexander; Andreassen, Rune ; Eiken, Hans Geir; Aarnes, Siv; Tobiassen, Camilla; Randa, Rolf; Wikan, Steinar; Hagen, Snorre (2014). Female brown bears in Sør-Varanger, Norway: localities and mother-cub relationships analyzed by genetic methods. ISBN: 9788217013631. 25 s. NIBIO.
https://hdl.handle.net/11250/2451524

Wartiainen, Ingvild; Andreassen, Rune ; Tobiassen, Camilla; Aarnes, Siv; Randa, Rolf; Turtumøygard, Stein; Wikan, Steinar; Eiken, Hans Geir (2009). Binneområder i Sør-Varanger. ISBN: 9788217005766. 14 s. NIBIO.
https://hdl.handle.net/11250/2472230

Andreassen, Rune ; Wartiainen, I; Tobiassen, C; Aarnes, S; Randa, R; Turtumøygard, S; Wikan, S; Eiken, Hans Geir (2009). Binneområder i Sør Varanger; undersøkelse av områdebruk og identifisering av mulig avkom ved feltobservasjoner og DNA analyse. ISBN: 9788217005766. 14 s. Bioforsk jord og miljø, Svanhovd.
https://hdl.handle.net/11250/4466431

Andreassen, Rune (2002). Minisatellite instability studied in one GC-rich (D7S22) and one AT-rich (DYF155S1) minisatellite locus. ISBN: 9788280720481. 75 s. Universitetet i Oslo.
https://hdl.handle.net/11250/4532000



Publikasjonslisten er hentet ut av Nasjonalt vitenarkiv (NVA). Listen kan være ufullstendig.

Formidling

Andreassen, Rune (2026). Transcriptome wide in vivo characterization of miRNA targets unravels post transcriptional control of host immune system key genes. Faglige lunsjmøter Insititutt for Naturvitenskapelige helse fag, OsloMet. OsloMet.
https://hdl.handle.net/11250/5537406

Andreassen, Rune ; Woldemariam, Nardos Tesfaye ; Sindre, Hilde; Ramberg, Sigmund; Shwe, Alice (2026). Transcriptome-wide in vivo identification of miRNA target genes in Atlantic salmon. Plant and Animal Genome meeting 2026. PAG.
https://hdl.handle.net/11250/5537407

Andreassen, Rune ; Ramberg, Sigmund (2025). Transcriptome-wide in vivo identification of miRNA target genes in Atlantic salmon. International society of Animal Genetics 40th conference, 2026. ISAG.
https://hdl.handle.net/11250/5275123

Andreassen, Rune ; Shwe, Alice (2024). microRNA and regulation of the developmental process that transforms Atlantic salmon parr into saltwater adapted smolt. NorSeq Core Facility meeting on groundbreaking innovations in NGS. NorSeq and Qiagen.
https://hdl.handle.net/11250/5136587

Ramberg, Sigmund; Høyheim, Bjørn; Østbye, Tone-Kari K; Andreassen, Rune (2024). A single-molecule-long-read transcriptome reveals thousands of novel splice variants in Atlantic salmon. The 5th International Conference on Integrative Salmonid Biology (ICISB). International Cooperation to Sequence the Atlantic Salmon Ge.
https://hdl.handle.net/11250/3606500

Andreassen, Rune ; Ramberg, Sigmund; Colquhoun, Duncan John; Krasnov, Aleksei (2024). MicroRNAs and their predicted target genes associated with winter-ulcer in Atlantic salmon. The 5th International Conference on Integrative Salmonid Biology (ICISB). The International Cooperation to Sequence the Atlantic Salm.
https://hdl.handle.net/11250/4385844

Andreassen, Rune (2024). Undersøkelse av biologiske spor i kriminalsaker og slektskapsanalyser. MIKS (Generell mikrobiologi, Spesiell mikrobiologi, Molekylær mikrobiologi, Smittevern og «Forskning og utvikling»). Ahus mikrobiologisk avdeling.
https://hdl.handle.net/11250/3500250

Andreassen, Rune (2023). Mikro-RNA: små-ikke-kodende RNA-molekyler med stor effekt på genuttrykk. Forskningsseminar for studenter og ansatte bioingeniør og master. Bio, NVH, OsloMet.
https://hdl.handle.net/11250/4041726

Andreassen, Rune ; Ramberg, Sigmund (2023). MicroSalmon: Comprehensive Databases for Predicted microRNA Target Transcripts and Cis-Regulatory Elements in the 3’UTRs of the Full-Length Sequenced Atlantic Salmon Transcriptome. Plant and animal genome meeting 30. PAG.
https://hdl.handle.net/11250/4811745

Andreassen, Rune (2023). CRISPR som metode. BIO2023 NML Conference. NITO.
https://hdl.handle.net/11250/3336084



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