Norwegian version
Rune Andreassen

Rune Andreassen

Fields of study

Academic disciplines

Genetics and genomics   Molecular biology

Subject areas

Method development   Population genetics   Forensic Genetics   MiRNA   Characterization of genes in Salmo salar   Deep sequencing

Scientific publications

Verleih, Marieke; Visnovska, Martina; Nguinkal, Julien; Rebl, Alexander; Goldammer, Tom; Andreassen, Rune (2023). The Discovery and Characterization of Conserved and Novel miRNAs in the Different Developmental Stages and Organs of Pikeperch (Sander lucioperca). 22 p. International Journal of Molecular Sciences. Vol. 25.

Hansen, Sine Alise Hartvigsen; Ramberg, Sigmund; Kiryushchenko, Nadezhda; Høyheim, Bjørn; Horsberg, Tor Einar; Andreassen, Rune ; Bakke, Marit Jørgensen (2023). De novo high-accuracy transcriptomes from long-read sequencing reveals a wide variety of novel splice variants in copepodids and adult female salmon lice (Lepeophtheirus salmonis). Frontiers in Marine Science. Vol. 10.

Ramberg, Sigmund; Krasnov, Aleksei; Colquhoun, Duncan John; Wallace, Christian; Andreassen, Rune (2022). Expression analysis of Moritella viscosa-challenged Atlantic salmon identifies disease-responding Genes, MicroRNAs and their predicted target genes and pathways. International Journal of Molecular Sciences. Vol. 23.

Chakraborty, Setu; Woldemariam, Nardos Tesfaye ; Visnovska, Martina; Rise, Matthew L.; Boyce, Danny; Santander, Javier; Andreassen, Rune (2022). Characterization of miRNAs in Embryonic, Larval, and Adult Lumpfish Provides a Reference miRNAome for Cyclopterus lumpus. 19 p. Biology (Basel). Vol. 11.

Shwe, Alice ; Krasnov, Aleksei; Visnovska, Martina; Ramberg, Sigmund; Østbye, Tone-kari K; Andreassen, Rune (2022). Expression Analysis in Atlantic Salmon Liver Reveals miRNAs Associated with Smoltification and Seawater Adaptation. 19 p. Biology (Basel). Vol. 11.

Shwe, Alice ; Krasnov, Aleksei; Visnovska, Martina; Ramberg, Sigmund; Østbye, Tone-kari K; Andreassen, Rune (2022). Differential Expression of miRNAs and Their Predicted Target Genes Indicates That Gene Expression in Atlantic Salmon Gill Is Post-Transcriptionally Regulated by miRNAs in the Parr-Smolt Transformation and Adaptation to Sea Water. International Journal of Molecular Sciences. Vol. 23.

Ramberg, Sigmund; Andreassen, Rune (2021). MicroSalmon: A Comprehensive, Searchable Resource of Predicted MicroRNA Targets and 3’UTR Cis-Regulatory Elements in the Full-Length Sequenced Atlantic Salmon Transcriptome. Non-coding RNA. Vol. 7.

Ramberg, Sigmund; Høyheim, Bjørn; Østbye, Tone-Kari K; Andreassen, Rune (2021). A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. 22 p. Frontiers in Genetics. Vol. 12.

Smith, Nicole; Umasuthan, Navaneethaiyer; Kumar, Surendra; Woldemariam, Nardos Tesfaye ; Andreassen, Rune ; Christian, Sherri; Rise, Matthew L. (2021). Transcriptome Profiling of Atlantic Salmon Adherent Head Kidney Leukocytes Reveals That Macrophages Are Selectively Enriched During Culture. Frontiers in Immunology. Vol. 12.

Østbye, Tone-Kari K; Woldemariam, Nardos Tesfaye ; Lundberg, Camilla Elise; Berge, Gerd Marit; Ruyter, Bente; Andreassen, Rune (2021). Modulation of hepatic miRNA expression in Atlantic salmon (Salmo salar) by family background and dietary fatty acid composition. Journal of Fish Biology.

These publications are obtained from Cristin. The list may be incomplete