Fields of study
Academic disciplines
Genetics and genomics Molecular biology
Subject areas
Method development Population genetics Forensic Genetics MiRNA Characterization of genes in Salmo salar Deep sequencing
Publications and research
Scientific publications
Hansen, Sine Alise Hartvigsen;
Ramberg, Sigmund
; Kiryushchenko, Nadezhda; Høyheim, Bjørn; Horsberg, Tor Einar;
Andreassen, Rune
; Bakke, Marit Jørgensen
(2023).
De novo high-accuracy transcriptomes from long-read sequencing reveals a wide variety of novel splice variants in copepodids and adult female salmon lice (Lepeophtheirus salmonis).
Frontiers in Marine Science.
Vol. 10.
https://doi.org/10.3389/fmars.2023.1167402
Ramberg, Sigmund
; Krasnov, Aleksei; Colquhoun, Duncan John; Wallace, Christian;
Andreassen, Rune
(2022).
Expression analysis of Moritella viscosa-challenged Atlantic salmon identifies disease-responding Genes, MicroRNAs and their predicted target genes and pathways.
International Journal of Molecular Sciences.
Vol. 23.
https://doi.org/10.3390/ijms231911200
Chakraborty, Setu;
Woldemariam, Nardos Tesfaye
; Visnovska, Martina; Rise, Matthew L.; Boyce, Danny; Santander, Javier;
Andreassen, Rune
(2022).
Characterization of miRNAs in Embryonic, Larval, and Adult Lumpfish Provides a Reference miRNAome for Cyclopterus lumpus.
19 p.
Biology (Basel).
Vol. 11.
https://doi.org/10.3390/biology11010130
Shwe, Alice
; Krasnov, Aleksei; Visnovska, Martina;
Ramberg, Sigmund
; Østbye, Tone-kari K;
Andreassen, Rune
(2022).
Differential Expression of miRNAs and Their Predicted Target Genes Indicates That Gene Expression in Atlantic Salmon Gill Is Post-Transcriptionally Regulated by miRNAs in the Parr-Smolt Transformation and Adaptation to Sea Water.
International Journal of Molecular Sciences.
Vol. 23.
https://doi.org/10.3390/ijms23158831
Shwe, Alice
; Krasnov, Aleksei; Visnovska, Martina;
Ramberg, Sigmund
; Østbye, Tone-kari K;
Andreassen, Rune
(2022).
Expression Analysis in Atlantic Salmon Liver Reveals miRNAs Associated with Smoltification and Seawater Adaptation.
19 p.
Biology (Basel).
Vol. 11.
https://doi.org/10.3390/biology11050688
Ramberg, Sigmund
;
Andreassen, Rune
(2021).
MicroSalmon: A Comprehensive, Searchable Resource of Predicted MicroRNA Targets and 3’UTR Cis-Regulatory Elements in the Full-Length Sequenced Atlantic Salmon Transcriptome.
Non-coding RNA.
Vol. 7.
https://doi.org/10.3390/ncrna7040061
Ramberg, Sigmund
; Høyheim, Bjørn; Østbye, Tone-Kari K;
Andreassen, Rune
(2021).
A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon.
22 p.
Frontiers in Genetics.
Vol. 12.
https://doi.org/10.3389/fgene.2021.656334
Smith, Nicole; Umasuthan, Navaneethaiyer; Kumar, Surendra;
Woldemariam, Nardos Tesfaye
;
Andreassen, Rune
; Christian, Sherri; Rise, Matthew L.
(2021).
Transcriptome Profiling of Atlantic Salmon Adherent Head Kidney Leukocytes Reveals That Macrophages Are Selectively Enriched During Culture.
Frontiers in Immunology.
Vol. 12.
https://doi.org/10.3389/fimmu.2021.709910
Østbye, Tone-Kari K;
Woldemariam, Nardos Tesfaye
; Lundberg, Camilla Elise; Berge, Gerd Marit; Ruyter, Bente;
Andreassen, Rune
(2021).
Modulation of hepatic miRNA expression in Atlantic salmon (Salmo salar) by family background and dietary fatty acid composition.
Journal of Fish Biology.
https://doi.org/10.1111/jfb.14649
Shwe, Alice
; Østbye, Tone-Kari K; Krasnov, Aleksei;
Ramberg, Sigmund
;
Andreassen, Rune
(2020).
Characterization of Differentially Expressed miRNAs and Their Predicted Target Transcripts during Smoltification and Adaptation to Seawater in Head Kidney of Atlantic Salmon.
19 p.
Genes.
Vol. 11.
https://doi.org/10.3390/genes11091059