Fagområder
Vitenskapsdisipliner
Genetikk og genomikk Molekylærbiologi
Emner
Metodeutvikling Populasjonsgenetikk Rettsgenetikk MiRNA Genkarakterisering i Salmo salar Dypsekvensering
Publikasjoner og forskningsresultater
Vitenskapelige publikasjoner
Hansen, Sine Alise Hartvigsen; Ramberg, Sigmund; Kiryushchenko, Nadezhda; Høyheim, Bjørn; Horsberg, Tor Einar; Andreassen, Rune; Bakke, Marit Jørgensen
(2023).
De novo high-accuracy transcriptomes from long-read sequencing reveals a wide variety of novel splice variants in copepodids and adult female salmon lice (Lepeophtheirus salmonis).
Frontiers in Marine Science.
Vol. 10.
https://doi.org/10.3389/fmars.2023.1167402
Ramberg, Sigmund; Krasnov, Aleksei; Colquhoun, Duncan John; Wallace, Christian; Andreassen, Rune
(2022).
Expression analysis of Moritella viscosa-challenged Atlantic salmon identifies disease-responding Genes, MicroRNAs and their predicted target genes and pathways.
International Journal of Molecular Sciences.
Vol. 23.
https://doi.org/10.3390/ijms231911200
Chakraborty, Setu; Woldemariam, Nardos Tesfaye; Visnovska, Martina; Rise, Matthew L.; Boyce, Danny; Santander, Javier; Andreassen, Rune
(2022).
Characterization of miRNAs in Embryonic, Larval, and Adult Lumpfish Provides a Reference miRNAome for Cyclopterus lumpus.
19 s.
Biology (Basel).
Vol. 11.
https://doi.org/10.3390/biology11010130
Shwe, Alice; Krasnov, Aleksei; Visnovska, Martina; Ramberg, Sigmund; Østbye, Tone-kari K; Andreassen, Rune
(2022).
Differential Expression of miRNAs and Their Predicted Target Genes Indicates That Gene Expression in Atlantic Salmon Gill Is Post-Transcriptionally Regulated by miRNAs in the Parr-Smolt Transformation and Adaptation to Sea Water.
International Journal of Molecular Sciences.
Vol. 23.
https://doi.org/10.3390/ijms23158831
Shwe, Alice; Krasnov, Aleksei; Visnovska, Martina; Ramberg, Sigmund; Østbye, Tone-kari K; Andreassen, Rune
(2022).
Expression Analysis in Atlantic Salmon Liver Reveals miRNAs Associated with Smoltification and Seawater Adaptation.
19 s.
Biology (Basel).
Vol. 11.
https://doi.org/10.3390/biology11050688
Ramberg, Sigmund; Andreassen, Rune
(2021).
MicroSalmon: A Comprehensive, Searchable Resource of Predicted MicroRNA Targets and 3’UTR Cis-Regulatory Elements in the Full-Length Sequenced Atlantic Salmon Transcriptome.
Non-coding RNA.
Vol. 7.
https://doi.org/10.3390/ncrna7040061
Ramberg, Sigmund; Høyheim, Bjørn; Østbye, Tone-Kari K; Andreassen, Rune
(2021).
A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon.
22 s.
Frontiers in Genetics.
Vol. 12.
https://doi.org/10.3389/fgene.2021.656334
Smith, Nicole; Umasuthan, Navaneethaiyer; Kumar, Surendra; Woldemariam, Nardos Tesfaye; Andreassen, Rune; Christian, Sherri; Rise, Matthew L.
(2021).
Transcriptome Profiling of Atlantic Salmon Adherent Head Kidney Leukocytes Reveals That Macrophages Are Selectively Enriched During Culture.
Frontiers in Immunology.
Vol. 12.
https://doi.org/10.3389/fimmu.2021.709910
Østbye, Tone-Kari K; Woldemariam, Nardos Tesfaye; Lundberg, Camilla Elise; Berge, Gerd Marit; Ruyter, Bente; Andreassen, Rune
(2021).
Modulation of hepatic miRNA expression in Atlantic salmon (Salmo salar) by family background and dietary fatty acid composition.
Journal of Fish Biology.
https://doi.org/10.1111/jfb.14649
Shwe, Alice; Østbye, Tone-Kari K; Krasnov, Aleksei; Ramberg, Sigmund; Andreassen, Rune
(2020).
Characterization of Differentially Expressed miRNAs and Their Predicted Target Transcripts during Smoltification and Adaptation to Seawater in Head Kidney of Atlantic Salmon.
19 s.
Genes.
Vol. 11.
https://doi.org/10.3390/genes11091059