Rune Andreassen

Vitenskapelige publikasjoner

Chakraborty, Setu; Woldemariam, Nardos Tesfaye; Visnovska, Tina; Rise, Matthew L.; Santander, Javier; Andreassen, Rune (2022). Characterization of miRNAs in Embryonic, Larval, and Adult Lumpfish Provides a Reference miRNAome for Cyclopterus lumpus. 19 s. Biology (Basel) . Vol. 11. https:// doi.org/10.3390/biology11010130

Ramberg, Sigmund; Andreassen, Rune (2021). MicroSalmon: A Comprehensive, Searchable Resource of Predicted MicroRNA Targets and 3’UTR Cis-Regulatory Elements in the Full-Length Sequenced Atlantic Salmon Transcriptome. Non-coding RNA . Vol. 7.

Smith, Nicole; Umasuthan, Navaneethaiyer; Kumar, Surendra; Woldemariam, Nardos Tesfaye; Andreassen, Rune; Christian, Sherri; Rise, Matthew L. (2021). Transcriptome Profiling of Atlantic Salmon Adherent Head Kidney Leukocytes Reveals That Macrophages Are Selectively Enriched During Culture. Frontiers in Immunology . Vol. 12.

Ramberg, Sigmund; Høyheim, Bjørn; Østbye, Tone-Kari K; Andreassen, Rune (2021). A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. 22 s. Frontiers in Genetics . Vol. 12.
https://hdl.handle.net/11250/2756069

Østbye, Tone-Kari K; Woldemariam, Nardos Tesfaye; Lundberg, Camilla S.; Berge, Gerd Marit; Ruyter, Bente; Andreassen, Rune (2021). Modulation of hepatic miRNA expression in Atlantic salmon (Salmo salar) by family background and dietary fatty acid composition. Journal of Fish Biology .
https://hdl.handle.net/11250/2724977

Smith, Nicole; wajnberg, gabriel; Chacko, Simi; Woldemariam, Nardos Tesfaye; LaCroix, Jacynthe; Crapoulet, Nicolas; Ayre, D. Craig; Lewis, Stephen M.; Rise, Matthew L.; Andreassen, Rune; Christian, Sherri (2020). Characterization of miRNAs in Extracellular Vesicles Released From Atlantic Salmon Monocyte-Like and Macrophage-Like Cells. Frontiers in Immunology . Vol. 11.

Shwe, Alice; Østbye, Tone-Kari K; Krasnov, Aleksei; Ramberg, Sigmund; Andreassen, Rune (2020). Characterization of Differentially Expressed miRNAs and Their Predicted Target Transcripts during Smoltification and Adaptation to Seawater in Head Kidney of Atlantic Salmon. Genes . Vol. 11.
https://hdl.handle.net/11250/2678195

Woldemariam, Nardos Tesfaye; Agafonov, Oleg; Sindre, Hilde; Høyheim, Bjørn; Houston, Ross D.; Robledo, Diego; Bron, James E.; Andreassen, Rune (2020). miRNAs Predicted to Regulate Host Anti-viral Gene Pathways in IPNV-Challenged Atlantic Salmon Fry Are Affected by Viral Load, and Associated With the Major IPN Resistance QTL Genotypes in Late Infection. 17 s. Frontiers in Immunology . Vol. 11.
https://hdl.handle.net/10037/19391

Smith, Nicole; Woldemariam, Nardos Tesfaye; Rise, Matthew L.; Andreassen, Rune; Christian, Sherri; Clow, Kathy (2020). Characterization of miRNAs in Cultured Atlantic Salmon Head Kidney Monocyte-Like and Macrophage-Like Cells. 22 s. International Journal of Molecular Sciences . Vol. 21.

Xue, Xi; Woldemariam, Nardos Tesfaye; Caballero-Solares, Albert; Umasuthan, Navaneethaiyer; D. Fast, Mark; G. Taylor, Richard; Rise, Matthew L.; Andreassen, Rune (2019). Dietary Immunostimulant CpG Modulates MicroRNA Biomarkers Associated with Immune Responses in Atlantic Salmon (Salmo salar). 23 s. Cells . Vol. 8.
http://hdl.handle.net/11250/2634811

Forskningsrapporter

Kopatz, Alexander; Andreassen, Rune; Kling, Daniel; Randa, Rolf; Forfang, Kristin; Hagen, Snorre; Eiken, Hans Geir (2017). Family groups of brown bears in Sør-Varanger, Norway Application of SNP and STR markers to reconstruct pedigrees from DNA-samples noninvasively collected 2004-2016. ISBN: 978-82-17-02006-6. 40 s.
http://hdl.handle.net/11250/2493447

Kopatz, Alexander; Andreassen, Rune; Eiken, Hans Geir; Aarnes, Siv; Tobiassen, Camilla; Randa, Rolf; Wikan, Steinar; Hagen, Snorre (2014). Female brown bears in Sør-Varanger, Norway: localities and mother-cub relationships analyzed by genetic methods. ISBN: 978-82-17-01363-1. 25 s.
http://hdl.handle.net/11250/2451524

Wartiainen, Ingvild; Andreassen, Rune; Tobiassen, Camilla; Aarnes, Siv; Randa, Rolf; Turtumøygard, Stein; Wikan, Steinar; Eiken, Hans Geir (2009). Binneområder i Sør-Varanger. ISBN: 978-82-17-00576-6. 14 s.
http://hdl.handle.net/11250/2468777

Andreassen, Rune; Wartiainen, I; Tobiassen, C; Aarnes, S; Randa, R; Turtumøygard, S; Wikan, S; Eiken, Hans Geir (2009). Binneområder i Sør Varanger; undersøkelse av områdebruk og identifisering av mulig avkom ved feltobservasjoner og DNA analyse. ISBN: 978-82-17-00576-6. 14 s. Prosjektnr 4310101

Andreassen, Rune (2002). Minisatellite instability studied in one GC-rich (D7S22) and one AT-rich (DYF155S1) minisatellite locus. ISBN: 82-8072-048-0. 75 s.

Formidling

Ramberg, Sigmund; Andreassen, Rune (2022). MicroSalmon: Comprehensive Databases for Predicted microRNA Targets and 3’UTR Cis-Regulatory Elements in the Full-Length Sequenced Atlantic Salmon Transcriptome. Plant and Animal Genome conference 2022. Plant and Animal Genome Conference genomic.

Shwe, Alice; Østbye, Tone-Kari K; Ramberg, Sigmund; Krasnov, Aleksei; Andreassen, Rune (2022). Characterization of differentially expressed miRNAs and their predicted target transcripts during smoltification and adaptation to seawater in head kidney of Atlantic salmon. Plant and Animal Genome conference 2022. Plant and Animal Genome Conference genomic.

Shwe, Alice; Østbye, Tone-Kari K; Ramberg, Sigmund; Krasnov, Aleksei; Andreassen, Rune (2022). Characterization of differentially expressed miRNAs and their predicted target transcripts during smoltification and adaptation to seawater in head kidney of Atlantic salmon. Aquaculture workshop Plant and Animal Genome Conference 2022. Plant and Animal Genome Conference Aquaculture.

Ramberg, Sigmund; Østbye, Tone-Kari K; Høyheim, Bjørn; Andreassen, Rune (2022). A de novo full-length mRNA transcriptome generated from hybrid-corrected PacBio long-reads improves the transcript annotation and identifies thousands of novel splice variants in Atlantic Salmon. Plant and Animal Genome conference 2022. Plant and Animal Genome Conference genomic.

Ramberg, Sigmund; Østbye, Tone-Kari K; Høyheim, Bjørn; Andreassen, Rune (2022). A de novo full-length mRNA transcriptome generated from hybrid-corrected PacBio long-reads improves the transcript annotation and identifies thousands of novel splice variants in Atlantic Salmon. Aquaculture workshop Plan and Animal Genome Conference 2022. Plant and Animal Genome Conference Aquaculture.

Ramberg, Sigmund; Andreassen, Rune (2021). A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. Seminar series of Faculty of Health, OsloMet. OsloMet.

Shwe, Alice; Andreassen, Rune (2021). Modulation of Atlantic salmon miRNA expression during smoltification and seawater adaption. Seminar series of Faculty of Health, OsloMet. OsloMet.

Andreassen, Rune; Ramberg, Sigmund (2021). Atlantic salmon Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads. GIYK01000000

Andreassen, Rune; Ramberg, Sigmund (2021). MicroSalmon: A Comprehensive, Searchable Resource of Predicted MicroRNA Targets and 3’UTR Cis‐Regulatory Elements in the Full‐Length Sequenced Atlantic Salmon Transcriptome.

Andreassen, Rune (2020). mikroRNA gener som regulatorer av immunrespons ved sykdom og stress. Havbruk 2020. Norsk Forskningsråd.