Rune Andreassen

Vitenskapelige publikasjoner

Ramberg, Sigmund; Krasnov, Aleksei; Colquhoun, Duncan John; Wallace, Christian; Andreassen, Rune (2022). Expression analysis of Moritella viscosa-challenged Atlantic salmon identifies disease-responding Genes, MicroRNAs and their predicted target genes and pathways. International Journal of Molecular Sciences . Vol. 23:11200.
https://hdl.handle.net/11250/3025752

Shwe, Alice; Krasnov, Aleksei; Visnovska, Martina; Ramberg, Sigmund; Østbye, Tone-kari K; Andreassen, Rune (2022). Differential Expression of miRNAs and Their Predicted Target Genes Indicates That Gene Expression in Atlantic Salmon Gill Is Post-Transcriptionally Regulated by miRNAs in the Parr-Smolt Transformation and Adaptation to Sea Water. International Journal of Molecular Sciences . Vol. 23.
https://hdl.handle.net/11250/3016238

Shwe, Alice; Krasnov, Aleksei; Visnovska, Martina; Ramberg, Sigmund; Østbye, Tone-kari K; Andreassen, Rune (2022). Expression Analysis in Atlantic Salmon Liver Reveals miRNAs Associated with Smoltification and Seawater Adaptation. Biology (Basel) . Vol. 11. https://doi.org/10.3390/ biology11050688

Chakraborty, Setu; Woldemariam, Nardos Tesfaye; Visnovska, Martina; Rise, Matthew L.; Boyce, Danny; Santander, Javier; Andreassen, Rune (2022). Characterization of miRNAs in Embryonic, Larval, and Adult Lumpfish Provides a Reference miRNAome for Cyclopterus lumpus. 19 s. Biology (Basel) . Vol. 11. https:// doi.org/10.3390/biology11010130

Ramberg, Sigmund; Andreassen, Rune (2021). MicroSalmon: A Comprehensive, Searchable Resource of Predicted MicroRNA Targets and 3’UTR Cis-Regulatory Elements in the Full-Length Sequenced Atlantic Salmon Transcriptome. Non-coding RNA . Vol. 7.

Smith, Nicole; Umasuthan, Navaneethaiyer; Kumar, Surendra; Woldemariam, Nardos Tesfaye; Andreassen, Rune; Christian, Sherri; Rise, Matthew L. (2021). Transcriptome Profiling of Atlantic Salmon Adherent Head Kidney Leukocytes Reveals That Macrophages Are Selectively Enriched During Culture. Frontiers in Immunology . Vol. 12.

Ramberg, Sigmund; Høyheim, Bjørn; Østbye, Tone-Kari K; Andreassen, Rune (2021). A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. 22 s. Frontiers in Genetics . Vol. 12.
https://hdl.handle.net/11250/2756069

Østbye, Tone-Kari K; Woldemariam, Nardos Tesfaye; Lundberg, Camilla S.; Berge, Gerd Marit; Ruyter, Bente; Andreassen, Rune (2021). Modulation of hepatic miRNA expression in Atlantic salmon (Salmo salar) by family background and dietary fatty acid composition. Journal of Fish Biology .
https://hdl.handle.net/11250/2724977

Smith, Nicole; wajnberg, gabriel; Chacko, Simi; Woldemariam, Nardos Tesfaye; LaCroix, Jacynthe; Crapoulet, Nicolas; Ayre, D. Craig; Lewis, Stephen M.; Rise, Matthew L.; Andreassen, Rune; Christian, Sherri (2020). Characterization of miRNAs in Extracellular Vesicles Released From Atlantic Salmon Monocyte-Like and Macrophage-Like Cells. Frontiers in Immunology . Vol. 11.

Shwe, Alice; Østbye, Tone-Kari K; Krasnov, Aleksei; Ramberg, Sigmund; Andreassen, Rune (2020). Characterization of Differentially Expressed miRNAs and Their Predicted Target Transcripts during Smoltification and Adaptation to Seawater in Head Kidney of Atlantic Salmon. Genes . Vol. 11.
https://hdl.handle.net/11250/2678195

Forskningsrapporter

Kopatz, Alexander; Andreassen, Rune; Kling, Daniel; Randa, Rolf; Forfang, Kristin; Hagen, Snorre; Eiken, Hans Geir (2017). Family groups of brown bears in Sør-Varanger, Norway Application of SNP and STR markers to reconstruct pedigrees from DNA-samples noninvasively collected 2004-2016. ISBN: 978-82-17-02006-6. 40 s.
http://hdl.handle.net/11250/2493447

Kopatz, Alexander; Andreassen, Rune; Eiken, Hans Geir; Aarnes, Siv; Tobiassen, Camilla; Randa, Rolf; Wikan, Steinar; Hagen, Snorre (2014). Female brown bears in Sør-Varanger, Norway: localities and mother-cub relationships analyzed by genetic methods. ISBN: 978-82-17-01363-1. 25 s.
http://hdl.handle.net/11250/2451524

Wartiainen, Ingvild; Andreassen, Rune; Tobiassen, Camilla; Aarnes, Siv; Randa, Rolf; Turtumøygard, Stein; Wikan, Steinar; Eiken, Hans Geir (2009). Binneområder i Sør-Varanger. ISBN: 978-82-17-00576-6. 14 s.
http://hdl.handle.net/11250/2468777

Andreassen, Rune; Wartiainen, I; Tobiassen, C; Aarnes, S; Randa, R; Turtumøygard, S; Wikan, S; Eiken, Hans Geir (2009). Binneområder i Sør Varanger; undersøkelse av områdebruk og identifisering av mulig avkom ved feltobservasjoner og DNA analyse. ISBN: 978-82-17-00576-6. 14 s. Prosjektnr 4310101

Andreassen, Rune (2002). Minisatellite instability studied in one GC-rich (D7S22) and one AT-rich (DYF155S1) minisatellite locus. ISBN: 82-8072-048-0. 75 s.

Formidling

Andreassen, Rune (2022). Insights into miRNAs in teleost fish. Seminar at Research Institute for Farm Animal Biology, University of Rostock. Research Institute for Farm Animal Biology, Univ of Rostock.

Lekanova, Nadezhka; Hansen, Sine Alise Hartvigsen; Ramberg, Sigmund; Høyheim, Bjørn; Andreassen, Rune; Horsberg, Tor Einar; Bakke, Marit Jørgensen (2022). A de novo full-length mRNA transcriptome for Lepeophtheirus salmonis. SeaLice2022. Sea Lice conference international.

Shwe, Alice; Andreassen, Rune (2022). Differential Expression of miRNAs and Their Predicted Target Genes Indicates That Gene Expression in Atlantic Salmon Gill Is Post‐Transcriptionally Regulated by miRNAs in the Parr‐Smolt Transformation and Adaptation to Sea Water. Havbruk 2022. Norges forskningsråd.

Ramberg, Sigmund; Andreassen, Rune (2022). A de novo full-length mRNA transcriptome generated from hybrid-corrected PacBio long-reads improves the transcript annotation and identifies thousands of novel splice variants in Atlantic Salmon. Havbruk 2022. Norges forskningsråd.

Andreassen, Rune (2022). microRNAs, ikke-kodende, regulatoriske RNA molekyler assosiert med infekssjonsykdom, og smoltifisering og tilpasning til sjøvann. Havbruk 2022. Norges forskningsråd.

Verleih, Mariekeh; Goldammer, Tom; Andreassen, Rune (2022). IDENTIFICATION OF NOVEL AND CONSERVED miRNAS IN PIKEPERCH (SANDER LUCIOPERCA). European Aquaculture Society meeting 2022. European Aquaculture Society.

Shwe, Alice; Andreassen, Rune (2022). Differential Expression of miRNAs and Their Predicted Target Genes Indicates That Gene expression in Atlantic Salmon Gill is Post-Transcriptionally Regulated by miRNAs in the Smoltification and Adaptation to Seawater. European Aquaculture Society meeting 2022. European Aquaculture Society.

Ramberg, Sigmund; Andreassen, Rune (2022). A transcriptome generated from hybrid-corrected PacBio long-reads in Atlantic Salmon, which provides 71000 high-quality full-length sequenced mRNAs, and identifies thousands of novel splice variants. European Aquaculture Society meeting 2022. European Aquaculture Society.

Ramberg, Sigmund; Andreassen, Rune (2022). MicroSalmon: Comprehensive Databases for Predicted microRNA Targets and 3’UTR Cis-Regulatory Elements in the Full-Length Sequenced Atlantic Salmon Transcriptome. Plant and Animal Genome conference 2022. Plant and Animal Genome Conference genomic.

Shwe, Alice; Østbye, Tone-Kari K; Ramberg, Sigmund; Krasnov, Aleksei; Andreassen, Rune (2022). Characterization of differentially expressed miRNAs and their predicted target transcripts during smoltification and adaptation to seawater in head kidney of Atlantic salmon. Plant and Animal Genome conference 2022. Plant and Animal Genome Conference genomic.