English version
Rune Andreassen

Rune Andreassen

Fagområder

Vitenskapsdisipliner

Genetikk og genomikk   Molekylærbiologi

Emner

Metodeutvikling   Populasjonsgenetikk   Rettsgenetikk   MiRNA   Genkarakterisering i Salmo salar   Dypsekvensering

Vitenskapelige publikasjoner

Hansen, Sine Alise Hartvigsen; Ramberg, Sigmund; Kiryushchenko, Nadezhda; Høyheim, Bjørn; Horsberg, Tor Einar; Andreassen, Rune; Bakke, Marit Jørgensen (2023). De novo high-accuracy transcriptomes from long-read sequencing reveals a wide variety of novel splice variants in copepodids and adult female salmon lice (Lepeophtheirus salmonis). Frontiers in Marine Science. Vol. 10.
https://doi.org/10.3389/fmars.2023.1167402

Ramberg, Sigmund; Krasnov, Aleksei; Colquhoun, Duncan John; Wallace, Christian; Andreassen, Rune (2022). Expression analysis of Moritella viscosa-challenged Atlantic salmon identifies disease-responding Genes, MicroRNAs and their predicted target genes and pathways. International Journal of Molecular Sciences. Vol. 23.
https://doi.org/10.3390/ijms231911200

Chakraborty, Setu; Woldemariam, Nardos Tesfaye; Visnovska, Martina; Rise, Matthew L.; Boyce, Danny; Santander, Javier; Andreassen, Rune (2022). Characterization of miRNAs in Embryonic, Larval, and Adult Lumpfish Provides a Reference miRNAome for Cyclopterus lumpus. 19 s. Biology (Basel). Vol. 11.
https://doi.org/10.3390/biology11010130

Shwe, Alice; Krasnov, Aleksei; Visnovska, Martina; Ramberg, Sigmund; Østbye, Tone-kari K; Andreassen, Rune (2022). Differential Expression of miRNAs and Their Predicted Target Genes Indicates That Gene Expression in Atlantic Salmon Gill Is Post-Transcriptionally Regulated by miRNAs in the Parr-Smolt Transformation and Adaptation to Sea Water. International Journal of Molecular Sciences. Vol. 23.
https://doi.org/10.3390/ijms23158831

Shwe, Alice; Krasnov, Aleksei; Visnovska, Martina; Ramberg, Sigmund; Østbye, Tone-kari K; Andreassen, Rune (2022). Expression Analysis in Atlantic Salmon Liver Reveals miRNAs Associated with Smoltification and Seawater Adaptation. 19 s. Biology (Basel). Vol. 11.
https://doi.org/10.3390/biology11050688

Ramberg, Sigmund; Andreassen, Rune (2021). MicroSalmon: A Comprehensive, Searchable Resource of Predicted MicroRNA Targets and 3’UTR Cis-Regulatory Elements in the Full-Length Sequenced Atlantic Salmon Transcriptome. Non-coding RNA. Vol. 7.
https://doi.org/10.3390/ncrna7040061

Ramberg, Sigmund; Høyheim, Bjørn; Østbye, Tone-Kari K; Andreassen, Rune (2021). A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. 22 s. Frontiers in Genetics. Vol. 12.
https://doi.org/10.3389/fgene.2021.656334

Smith, Nicole; Umasuthan, Navaneethaiyer; Kumar, Surendra; Woldemariam, Nardos Tesfaye; Andreassen, Rune; Christian, Sherri; Rise, Matthew L. (2021). Transcriptome Profiling of Atlantic Salmon Adherent Head Kidney Leukocytes Reveals That Macrophages Are Selectively Enriched During Culture. Frontiers in Immunology. Vol. 12.
https://doi.org/10.3389/fimmu.2021.709910

Østbye, Tone-Kari K; Woldemariam, Nardos Tesfaye; Lundberg, Camilla Elise; Berge, Gerd Marit; Ruyter, Bente; Andreassen, Rune (2021). Modulation of hepatic miRNA expression in Atlantic salmon (Salmo salar) by family background and dietary fatty acid composition. Journal of Fish Biology.
https://doi.org/10.1111/jfb.14649

Shwe, Alice; Østbye, Tone-Kari K; Krasnov, Aleksei; Ramberg, Sigmund; Andreassen, Rune (2020). Characterization of Differentially Expressed miRNAs and Their Predicted Target Transcripts during Smoltification and Adaptation to Seawater in Head Kidney of Atlantic Salmon. 19 s. Genes. Vol. 11.
https://doi.org/10.3390/genes11091059





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