English version
Rune Andreassen

Rune Andreassen

Fagområder

Vitenskapsdisipliner

Genetikk og genomikk   Molekylærbiologi

Emner

Metodeutvikling   Populasjonsgenetikk   Rettsgenetikk   MiRNA   Genkarakterisering i Salmo salar   Dypsekvensering

Samarbeidsrelasjoner

National Collaboration: Bjørn Høyheim, The Medical Genetics research group at NMBU. Hans Geir Eikens Group, NIBIO. International Collaboration; Matthew Rise's group, Memorial University, Newfoundland, Canada. Ross Houston's group, Roslin Institute, Univ. of Edinburgh, Scotland. John Taggart's Group, University of Stirling, Scotland.

Vitenskapelige publikasjoner

Chakraborty, Setu; Woldemariam, Nardos Tesfaye; Visnovska, Tina; Rise, Matthew L.; Santander, Javier; Andreassen, Rune (2022). Characterization of miRNAs in Embryonic, Larval, and Adult Lumpfish Provides a Reference miRNAome for Cyclopterus lumpus. 19 s. Biology (Basel) . Vol. 11. https:// doi.org/10.3390/biology11010130

Ramberg, Sigmund; Andreassen, Rune (2021). MicroSalmon: A Comprehensive, Searchable Resource of Predicted MicroRNA Targets and 3’UTR Cis-Regulatory Elements in the Full-Length Sequenced Atlantic Salmon Transcriptome. Non-coding RNA . Vol. 7.

Smith, Nicole; Umasuthan, Navaneethaiyer; Kumar, Surendra; Woldemariam, Nardos Tesfaye; Andreassen, Rune; Christian, Sherri; Rise, Matthew L. (2021). Transcriptome Profiling of Atlantic Salmon Adherent Head Kidney Leukocytes Reveals That Macrophages Are Selectively Enriched During Culture. Frontiers in Immunology . Vol. 12.

Ramberg, Sigmund; Høyheim, Bjørn; Østbye, Tone-Kari K; Andreassen, Rune (2021). A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. 22 s. Frontiers in Genetics . Vol. 12.
https://hdl.handle.net/11250/2756069

Østbye, Tone-Kari K; Woldemariam, Nardos Tesfaye; Lundberg, Camilla S.; Berge, Gerd Marit; Ruyter, Bente; Andreassen, Rune (2021). Modulation of hepatic miRNA expression in Atlantic salmon (Salmo salar) by family background and dietary fatty acid composition. Journal of Fish Biology .
https://hdl.handle.net/11250/2724977

Smith, Nicole; wajnberg, gabriel; Chacko, Simi; Woldemariam, Nardos Tesfaye; LaCroix, Jacynthe; Crapoulet, Nicolas; Ayre, D. Craig; Lewis, Stephen M.; Rise, Matthew L.; Andreassen, Rune; Christian, Sherri (2020). Characterization of miRNAs in Extracellular Vesicles Released From Atlantic Salmon Monocyte-Like and Macrophage-Like Cells. Frontiers in Immunology . Vol. 11.

Shwe, Alice; Østbye, Tone-Kari K; Krasnov, Aleksei; Ramberg, Sigmund; Andreassen, Rune (2020). Characterization of Differentially Expressed miRNAs and Their Predicted Target Transcripts during Smoltification and Adaptation to Seawater in Head Kidney of Atlantic Salmon. Genes . Vol. 11.
https://hdl.handle.net/11250/2678195

Woldemariam, Nardos Tesfaye; Agafonov, Oleg; Sindre, Hilde; Høyheim, Bjørn; Houston, Ross D.; Robledo, Diego; Bron, James E.; Andreassen, Rune (2020). miRNAs Predicted to Regulate Host Anti-viral Gene Pathways in IPNV-Challenged Atlantic Salmon Fry Are Affected by Viral Load, and Associated With the Major IPN Resistance QTL Genotypes in Late Infection. 17 s. Frontiers in Immunology . Vol. 11.
https://hdl.handle.net/10037/19391

Smith, Nicole; Woldemariam, Nardos Tesfaye; Rise, Matthew L.; Andreassen, Rune; Christian, Sherri; Clow, Kathy (2020). Characterization of miRNAs in Cultured Atlantic Salmon Head Kidney Monocyte-Like and Macrophage-Like Cells. 22 s. International Journal of Molecular Sciences . Vol. 21.

Xue, Xi; Woldemariam, Nardos Tesfaye; Caballero-Solares, Albert; Umasuthan, Navaneethaiyer; D. Fast, Mark; G. Taylor, Richard; Rise, Matthew L.; Andreassen, Rune (2019). Dietary Immunostimulant CpG Modulates MicroRNA Biomarkers Associated with Immune Responses in Atlantic Salmon (Salmo salar). 23 s. Cells . Vol. 8.
http://hdl.handle.net/11250/2634811





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