Forskningsgrupper
Publikasjoner og forskningsresultater
Vitenskapelige publikasjoner
Helsem, Stian Aleksander; Alfsnes, Kristian; Frye, Stephan Alfons; Løvestad, Alexander Yanez Hesselberg;
Ambur, Ole Herman
(2025).
Two different and robustly modeled DNA binding modes of Competence Protein ComP - systematic modeling with AlphaFold 3, RoseTTAFold2NA, Chai-1 and re-docking in HADDOCK.
PLOS ONE.
Vol. 20.
https://doi.org/10.1371/journal.pone.0315160
Costanzi, Jean-Marc; Stosic, Milan; Løvestad, Alexander;
Ambur, Ole Herman
; Rounge, Trine Ballestad; Christiansen, Irene Kraus
(2024).
Changes in intrahost genetic diversity according to lesion severity in longitudinal HPV16 samples.
Journal of Medical Virology.
Vol. 96.
https://doi.org/10.1002/jmv.29641
Løvestad, Alexander; Stosic, Milan; Costanzi, Jean-Marc; Christiansen, Irene Kraus; Aamot, Hege Vangstein;
Ambur, Ole Herman
; Rounge, Trine Ballestad
(2023).
TaME-seq2: tagmentation-assisted multiplex
PCR enrichment sequencing for viral genomic
profiling.
Virology Journal.
Vol. 20.
https://doi.org/10.1186/s12985-023-02002-5
Marienborg, Kaja
;
Ambur, Ole Herman
; Økstad, Ole Andreas; Skaare, Dagfinn
(2023).
The alginate polymer OligoG alters susceptibility of biofilm-embedded non-typeable Haemophilus influenzae to ampicillin and ciprofloxacin.
JAC-Antimicrobial Resistance (JAC-AMR).
Vol. 5.
https://doi.org/10.1093/jacamr/dlad046
Løvestad, Alexander; Repesa, Adina; Costanzi, Jean-Marc; Lagström, Sonja; Christiansen, Irene Kraus; Rounge, Trine Ballestad;
Ambur, Ole Herman
(2022).
Differences in integration frequencies and APOBEC3 profiles of five high-risk HPV types adheres to phylogeny.
Tumour Virus Research.
Vol. 14.
https://doi.org/10.1016/j.tvr.2022.200247
Mandishora, Racheal S. Dube; Rounge, Trine Ballestad; Fitzpatrick, Megan; Christiansen, Hanne Irene Kraus;
Ambur, Ole Herman
; Lagström, Sonja; Stray-Pedersen, Babill; Tommasino, Massimo; Palefsky, Joel; Chirenje, Zvavahera M.
(2021).
Self-collected and clinician-collected anal swabs show modest agreement for HPV genotyping.
PLOS ONE.
Vol. 16.
https://doi.org/10.1371/journal.pone.0250426
Kværner, Ane Sørlie; Birkeland, Einar Elvbakken; Bucher-Johannessen, Cecilie; Vinberg, Elina; Nordby, Jan Inge; Kangas, Harri; Bemanian, Vahid; Ellonen, Pekka; Botteri, Edoardo; Natvig, Erik; Rognes, Torbjørn; Hovig, Eivind; Lyle, Robert;
Ambur, Ole Herman
; Vos, Willem M. de; Bultman, Scott J; Hjartåker, Anette; Landberg, Rikard; Song, Mingyang; Blix, Hege Salvesen; Ursin, Giske; Randel, Kristin Ranheim; Lange, Thomas de; Hoff, Geir; Holme, Øyvind; Berstad, Paula; Rounge, Trine Ballestad
(2021).
The CRCbiome study: a large prospective cohort study examining the role of lifestyle and the gut microbiome in colorectal cancer screening participants.
BMC Cancer.
Vol. 21.
https://doi.org/10.1186/s12885-021-08640-8
Løvestad, Alexander; Jørgensen, Silje Bakken; Handal, Nina;
Ambur, Ole Herman
; Aamot, Hege Vangstein
(2021).
Investigation of intra-hospital SARS-CoV-2 transmission using nanopore whole-genome sequencing.
Journal of Hospital Infection.
Vol. 111.
https://doi.org/10.1016/j.jhin.2021.02.022
Lagström, Sonja; Løvestad, Alexander; Umu, Sinan Uğur;
Ambur, Ole Herman
; Nygård, Mari; Rounge, Trine Ballestad; Christiansen, Irene Kraus
(2021).
HPV16 and HPV18 type-specific APOBEC3 and integration profiles in different diagnostic categories of cervical samples.
Tumour Virus Research.
Vol. 12.
https://doi.org/10.1016/j.tvr.2021.200221
Lagström, Sonja; Weele, Pascal van der; Rounge, Trine Ballestad; Christiansen, Irene Kraus; King, Audrey;
Ambur, Ole Herman
(2019).
HPV16 whole genome minority variants in persistent infections from young Dutch women.
Journal of Clinical Virology.
Vol. 119.
https://doi.org/10.1016/j.jcv.2019.08.003
